Welcome to the Nucleic Acid Function and Technology Group headed by Professor Jørgen Kjems. We are located at the Department of Molecular Biology, Faculty of Science, Aarhus University, Denmark, and are associated with the following research centers: Interdisciplinary Nanoscience Center (iNANO) and Centre for DNA Nanotechnology (CDNA).

Welcome to the Nucleic Acid Function and Technology Group headed by Professor Jørgen Kjems. We are working with RNA and DNA biochemistry, chemical modification of nucleic acids, cell biology, delivery of oligonucleotides to cells and animal models, fluorescence microscopy, atomic force microscopy (AFM) of nucleic acids. We are located at the Department of Molecular Biology, Faculty of Science, Aarhus University, Denmark, and are associated with the following research centers: Interdisciplinary Nanoscience Center (iNANO) and Centre for DNA Nanotechnology (CDNA). The group is composed of three research laboratories described below:
 

Nucleic Acid Technology lab

We design the structure and function of nucleic acids for applications in nanomedicine and nanotechnology. The main approaches are structural DNA nanotechnology for rational design of novel molecular devices and selection strategies for aptamer development. Apart from standard molecular biology techniques our main tools are computer modelling, chemical modification, and biophysical characterization.

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RNA interference lab

We study miRNA; the biogenesis and functionalities in context of cancer (bladder or oral) or in context of basic research to understand the mechanisms at stake. Furthermore, we optimize siRNA design towards high knockdown efficiency, low toxicity and minute off-target effects for superior siRNA performance in vivo

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Drug delivery lab

We develop drug carrier systems such as chitosan to deliver mainly siRNAs in vitro and in vivo. One of our main goals is to use siRNAs for therapeutic approaches in certain inflammatory diseases. Furthermore, we have a focus on optimizing bioimaging using for instance magnetic nanoparticles in combination with MRI. Last but not least we are also using nanoparticle functionalized 3D scaffolds (functionalized with e.g. siRNAs) and stem cells for a number of tissue engineering applications.

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RNAi highlights

The DNA 'origami' method was extended into 3D to create an addressable DNA box on the nanometre scale that can be opened by externally supplied DNA 'keys'. The study appeared online in Nature, May 6, 2009:

News

New single molecule study of hnRNP A1 interaction with telomere DNA G-quadruplex structures

Read more...
 

The DNA 'origami' method was extended into 3D to create an addressable DNA box on the nanometre scale that can be opened by externally supplied DNA 'keys'. The study appeared online at Nature, May 6, 2009: [Paper] [Podcast]

 

Kasper Jahn has won the EliteForsk travel award amounting to 250.000 DKK for his research on the application of DNA self-assembly chemistry for bringing together proteins and metal particles at the nano-scale.
Read the news here (in danish)

 
The SARSE - DNA origami package version 1.0 was released on the CDNA website (see intro page). The package makes it really easy to design complex DNA nanostructures. The package has a nice tutorial that goes through the steps involved in creating the logo of the University of Aarhus in DNA (see tutorial).
 

Ebbe S Andersen and colleagues introduce their ACS nano paper about a software program for designing DNA origami structures and the characterization of DNA dolphins with flexible tails. The full article may be found at this DOI.